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NF-κB Family - Interactive Pathway and Product Listing

Merck:/topic/images/Biosciences/nfkb_family_pathway_sm.gif

NF-κB: A Therapeutic Target for Inflammation & Cancer

The eukaryotic nuclear factor kB (NF-kB) plays an important role in inflammation, autoimmune response, cell proliferation, and apoptosis by regulating the expression of genes involved in these processes. Five members of the NF-kB family have been identified: NF-kB1 (p50/p105), NF-kB2 (p52/p100), RelA (p65), RelB, and c-Rel. They share a highly conserved Rel homology domain (RHD), which is responsible for DNA binding, dimerization, and interaction with IkB. The p50/RelA(p65) heterodimer is the major Rel/NF-kB complex in most cells. RelB can act as both a transcriptional activator as well as a repressor of NF-kBdependent gene expression. It acts as an activator when it associates with p50 or p52. However, its inhibitory effect has been attributed to the formation of the RelA(p65):RelB heterodimer that does not bind to kB sites. Studies on NIH 3T3 cells have also shown that RelA(p65):RelB heterodimers are not regulated by IkB and are located in both the cytoplasm and the nucleus.

The activity of NF-kB is tightly regulated by its interaction with inhibitory IkB proteins. In most resting cells, NF-kB is sequestered in the cytoplasm in an inactive form associated with inhibitory molecules such as IkBa, IkBb, IkBe, p105, and p100. This interaction blocks the ability of NF-kB to bind to DNA and results in the NF-kB complex being primarily localized to the cytoplasm due to a strong nuclear export signal in IkBa. Following exposure to inflammatory cytokines, UV light, reactive oxygen species, or bacterial and viral toxins, the NF-kB signaling cascade is activated, leading to the complete degradation of IkB. This allows the translocation of unmasked NF-kB to the nucleus where it binds to the enhancer or promoter regions of target genes and regulates their transcription. In the nucleus, acetylation of NF-kB determines its active or inactive state. p300 and CBP acetyltransferases play a major role in the acetylation of RelA(p65), principally targeting Lys218, 221, 310 for modification. Acetylated NF-kB is active and is resistant to the inhibitory effects of IkB. However, when histone deacetylase 3 (HDAC3) deacetylates NF-kB, IkB readily binds to NF-kB and causes its translocation into the cytoplasm. Here HDAC3 serves as an intranuclear molecular switch that turns off the biological processes triggered by NF-kB. One of the target genes activated by NF-kB is that encoding IkBa. Newly synthesized IkBa can enter the nucleus, remove NF-kB from DNA, and export the complex back to the cytoplasm to restore its original latent state.

As mentioned above, the activation of NF-kB by extracellular inducers depends on the phosphorylation and subsequent degradation of IkB proteins. Activation of NF-kB is achieved through the action of a family of serine/threonine k (IKK). The IKK contains two catalytic subunits (IKKa and IKKb) and a regulatory/adapter protein NEMO (also known as IKKg). IKKa and IKKb phosphorylate IkB proteins and the members of the NF-kB family. All IkB proteins contain two conserved serine residues within their N-terminal area, which are phosphorylated by IKK. IKKa and IKKb share about 50% sequence homology and can interchangeably phosphorylate Ser32/36 of IkBa, and Ser19/23 of IkBb. These phosphorylation events lead to the immediate polyubiquitination of IkB proteins and rapid degradation by the 26S proteasome.

The Rel/NF-kB signal transduction pathway is misregulated in a variety of human cancers, especially those of lymphoid cell origin. Several human lymphoid cancer cells are reported to have mutations or amplifications of genes encoding NF-kB transcription factors. In most cancer cells NF-kB is constitutively active and resides in the nucleus. In some cases, this may be due to chronic stimulation of the IKK pathway, while in others the gene encoding IkBa may be defective. Such continuous nuclear NF-kB activity not only protects cancer cells from apoptotic cell death, but may even enhance their growth activity. Designing anti-tumor agents to block NF-kB activity or to increase their sensitivity to conventional chemotherapy may have great therapeutic value.


Antibodies

Product Application Species Reactivity Cat. No.
Anti-cRel Rabbit pAb ELISA (see comments)
Gel Shift (0.5-1 µl per assay)
Immunoblotting (1:500-1:1000)
Immunoprecipitation (see comments) 
human, not mouse PC139
Anti-IκBβ (Ab-1) Rabbit pAb ELISA (see comments)
Immunoblotting (1:500)
Immunoprecipitation (see comments) 
human, mouse, rat PC143
Anti-IκBα (Ab-1) Rabbit pAb Immunoblotting (1-2 µg/ml)
Frozen Sections (not recommended)
Immunofluorescence (not recommended)
Immunoprecipitation (not recommended) 
human, mouse PC381
Anti-IκBα (Ab-2) Rabbit pAb ELISA (see comments)
Immunoblotting (1:1000)
Immunoprecipitation (see comments)
 
human, mouse, rat PC142
Anti-IKKγ (400-416) Rabbit pAb Immunoblotting (0.5-1 µg/ml)  human, mouse, rat 400003
Anti-IKKβ Mouse mAb (10AG2) Immunoblotting (1-4 µg/ml, chemiluminescence)  human OP134
Anti-Interleukin-1 Receptor-Associated Kinase-3 (581-596) Rabbit pAb Immunoblotting (1:1000-1:2000)  human, mouse, rat 407160
Anti-NAK/TBK1 (712-727) Rabbit pAb Immunoblotting (0.5-1 µg/ml)  human, mouse, rat 477740
Anti-NF-κB (p50) (Ab-1) Rabbit pAb ELISA (see comments)
Gel Shift (0.5-1 µl/assay)
Immunoblotting (1:1000)
Immunoprecipitation (see comments) 
human, not mouse PC136
Anti-NF-κB (p65) Mouse mAb (2A12A7) ELISA (0.1-1 µg/ml)
Immunoblotting (1 µg/ml)
Gel Shift Assay (5-10 µg/ml) 
human ST1047
Anti-NF-κB (p65, RelA) (Ab-1) Rabbit pAb ELISA (see comments)
Gel Shift (0.5-1 µl/assay)
Immunoblotting (1:2000-1:5000, chemiluminescence)
Immunoprecipitation (see comments) 
human, mouse PC137
Anti-NF-κB (p65, RelA) (Ab-2) Rabbit pAb ELISA (see comments)
Gel Shift (see comments)
Immunoblotting (1:500, chemiluminescence)
Immunoprecipitation (see comments) 
human PC138
NF-κB Antibody Sampler Kit ELISA (see characteristics table and comments)
Gel Supershift (see characteristics table and comments)
Immunoblotting (see characteristics table and comments)
Immunoprecipitation (see characteristics table and comments) 
  ASK20
PhosphoDetect™ Anti-IκBα (pSer32/36) Mouse mAb (39A1413) Immunoblotting (1-2 µg/ml)
Immunoprecipitation (2 µg/ml) 
bovine, canine, human, mouse, porcine, rat OP142

Inhibitors of I-κB, NF-κB, and Related Products

Product Cat. No.
Acetyl-11-keto-β-Boswellic Acid, Boswellia serrata 110123
Andrographolide 172060
Aurothiomalate 189401
BAY 11-7082 196870
BAY 11-7085 196872
CAPE 211200
(E)-Capsaicin 211274
Evodiamine, Evodia rutaecarpa 341211
Gliotoxin, Gladiocladium fimbriatum 371715
Helenalin, Arnica montana 374001
Hypoestoxide, Hypoestes rosea 401006
IκB Kinase Inactive Control Peptide, Cell-Permeable 401478
IκB Kinase Inhibitor Peptide, Cell-Permeable 401477
IKK-2 Inhibitor IV 401481
IKK-2 Inhibitor, SC-514 401479
IKK-2 Inhibitor V 401482
IKK-2 Inhibitor VI 401483
IKK-3 Inhibitor IX 401488
IKK Inhibitor III, BMS-345541 401480
IKK Inhibitor II, Wedelolactone 401474
IKK Inhibitor VII 401486
IKK Inhibitor X 401489
InSolution™ BAY 11-7082 196871
InSolution™ IKK-2 Inhibitor, SC-514 401485
InSolution™ NF-κB Activation Inhibitor 481407
Isohelenin, Inula sp. 416157
NEMO-Binding Domain Binding Peptide, Cell-Permeable 480025
NEMO-Binding Domain Binding Peptide, Cell-Permeable, Negative Control 480030
NF-κB Activation Inhibitor 481406
NF-κB Activation Inhibitor III 481411
NF-κB Activation Inhibitor II, JSH-23 481408
NF-κB Activation Inhibitor V, 5HPP-33 100066
NF-κB Activation Inhibitor VI, BOT-64 481414
NF-κB SN50, Cell-Permeable Inhibitor Peptide 481480
NF-κB SN50M, Cell-Permeable Inactive Control Peptide 481486
NF-kB Activation Inhibitor IV 481412
Oridonin, R. rubescens 496915
Parthenolide, Tanacetum parthenium 512732
PPM-18 529570
Sulfasalazine 573500
TIRAP Inhibitor Peptide, Cell-Permeable 613570
TIRAP Inhibitor Peptide, Control, Cell-Permeable 613571
Withaferin A, Withania somnifera 681535
Wogonin, S. baicalensis 681670

© Merck KGaA, Darmstadt, Germany, 2013

All references to Merck refer to Merck KGaA, Darmstadt, Germany.


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